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CAS 144089-97-4

:

2'-Fluoro-N2-Isobutyryl-5'-O-DMT-2'-deoxyguanosine-3'-CE-Phosphoramidite

Description:
2'-Fluoro-N2-Isobutyryl-5'-O-DMT-2'-deoxyguanosine-3'-CE-Phosphoramidite is a modified nucleoside analog used primarily in the field of oligonucleotide synthesis. This compound features a 2'-fluoro modification, which enhances the stability and binding affinity of the nucleoside in nucleic acid structures. The N2-isobutyryl group serves as a protective moiety, while the 5'-O-DMT (dimethoxytrityl) group is crucial for the protection of the 5' hydroxyl during synthesis, allowing for selective coupling reactions. The 3'-CE (cyanoethyl) phosphoramidite functionality is essential for the incorporation of this nucleoside into growing oligonucleotide chains through phosphoramidite chemistry. The presence of these modifications contributes to the overall stability, solubility, and reactivity of the compound, making it valuable in the synthesis of modified oligonucleotides for research and therapeutic applications. Its unique structural features enable enhanced performance in various biochemical assays and potential applications in gene therapy and molecular diagnostics.
Formula:C44H53FN7O8P
InChI:InChI=1S/C44H53FN7O8P/c1-27(2)40(53)49-43-48-39-37(41(54)50-43)47-26-51(39)42-36(45)38(60-61(58-24-12-23-46)52(28(3)4)29(5)6)35(59-42)25-57-44(30-13-10-9-11-14-30,31-15-19-33(55-7)20-16-31)32-17-21-34(56-8)22-18-32/h9-11,13-22,26-29,35-36,38,42H,12,24-25H2,1-8H3,(H2,48,49,50,53,54)/t35-,36-,38-,42-,61?/m1/s1
InChI key:InChIKey=KJFUMXZZVYMQEU-AOCJBPQJSA-N
SMILES:C(OC[C@@H]1[C@@H](OP(N(C(C)C)C(C)C)OCCC#N)[C@@H](F)[C@@H](O1)N2C3=C(N=C2)C(=O)N=C(NC(C(C)C)=O)N3)(C4=CC=C(OC)C=C4)(C5=CC=C(OC)C=C5)C6=CC=CC=C6
Synonyms:
  • Guanosine, 5′-O-[bis(4-methoxyphenyl)phenylmethyl]-2′-deoxy-2′-fluoro-N-(2-methyl-1-oxopropyl)-, 3′-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]
  • Guanosine, 5′-O-[bis(4-methoxyphenyl)phenylmethyl]-2′-deoxy-2′-fluoro-N-(2-methyl-1-oxopropyl)-, 3′-[2-cyanoethyl bis(1-methylethyl)phosphoramidite]
  • DMT-2-F-dG(IBU)-CE Phosphoramidite
  • N-[9-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-3-fluorooxolan-2-yl]-6-oxo-3H-purin-2-yl]-2-methylpropanamide
  • 5'-O-DMT-2'-fluoro-N2-isobutyryl-2'-Deoxy-guanosine 3'-CE phosphoramidite
  • DMT-2FLUORO-DG(IB) AMIDITE
  • ibu-2'-F-dG Phosphoramidite
  • 2'-F-dG(iBu)-CE Phosphoramidite
  • 5'-O-[Bis(4-methoxyphenyl)phenylmethyl]-2'-deoxy-2'-fluoro-N-(2-methyl-1-oxopropyl)guanosine 3'-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]
  • 2'-fluoro-N2-isobutyryl-5'-O-(4, 4'-dimethoxytrityl)-2'-deoxyguanosine-3'-CE-Phosphoramidite
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