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CAS 178925-43-4

:

Cytidine, N-benzoyl-5′-O-[bis(4-methoxyphenyl)phenylmethyl]-5-bromo-2′-deoxy-, 3′-[2-cyanoethyl bis(1-methylethyl)phosphoramidite]

Description:
Cytidine, N-benzoyl-5′-O-[bis(4-methoxyphenyl)phenylmethyl]-5-bromo-2′-deoxy-, 3′-[2-cyanoethyl bis(1-methylethyl)phosphoramidite] is a complex chemical compound primarily used in the field of nucleic acid chemistry, particularly in the synthesis of oligonucleotides. This substance features a cytidine base, which is a nucleoside composed of a pyrimidine ring and a ribose sugar, modified with a benzoyl group and a phosphoramidite moiety that facilitates its incorporation into DNA strands during synthesis. The presence of bromine and methoxyphenyl groups enhances its reactivity and solubility, making it suitable for various biochemical applications. The phosphoramidite functionality allows for the formation of phosphodiester bonds, essential for building DNA sequences. Additionally, the compound's structure suggests potential for specific interactions with biological targets, which may be explored in therapeutic contexts. Overall, this compound exemplifies the intricate design often employed in synthetic nucleic acids, combining structural modifications that enhance functionality and reactivity.
Formula:C46H51BrN5O8P
InChI:InChI=1S/C46H51BrN5O8P/c1-31(2)52(32(3)4)61(58-27-13-26-48)60-40-28-42(51-29-39(47)43(50-45(51)54)49-44(53)33-14-9-7-10-15-33)59-41(40)30-57-46(34-16-11-8-12-17-34,35-18-22-37(55-5)23-19-35)36-20-24-38(56-6)25-21-36/h7-12,14-25,29,31-32,40-42H,13,27-28,30H2,1-6H3,(H,49,50,53,54)/t40-,41+,42+,61?/m0/s1
InChI key:InChIKey=MEFJNSFIFSEDNU-RYHMCHCNSA-N
SMILES:C(OC[C@@H]1[C@@H](OP(N(C(C)C)C(C)C)OCCC#N)C[C@@H](O1)N2C(=O)N=C(NC(=O)C3=CC=CC=C3)C(Br)=C2)(C4=CC=C(OC)C=C4)(C5=CC=C(OC)C=C5)C6=CC=CC=C6
Synonyms:
  • Cytidine, N-benzoyl-5′-O-[bis(4-methoxyphenyl)phenylmethyl]-5-bromo-2′-deoxy-, 3′-[2-cyanoethyl bis(1-methylethyl)phosphoramidite]
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