CAS 216699-36-4

1H,5H,11H,15H-Xantheno[2,3,4-ij:5,6,7-i'j′]diquinolizin-18-ium, 9-[2-carboxy-5-[[(2,5-dioxo-1-pyrrolidinyl)oxy]carbonyl]phenyl]-2,3,6,7,12,13,16,17-octahydro-, inner salt

Description:

The chemical substance known as "1H,5H,11H,15H-Xantheno[2,3,4-ij:5,6,7-i'j′]diquinolizin-18-ium, 9-[2-carboxy-5-[[(2,5-dioxo-1-pyrrolidinyl)oxy]carbonyl]phenyl]-2,3,6,7,12,13,16,17-octahydro-, inner salt" with CAS number 216699-36-4 is a complex organic compound characterized by its unique structural features, including a xanthenoquinolizinium core and multiple functional groups. This compound exhibits properties typical of polycyclic aromatic compounds, such as potential fluorescence and photochemical activity, which may be influenced by its intricate molecular architecture. The presence of carboxylic acid and pyrrolidine moieties suggests that it may engage in various chemical interactions, including hydrogen bonding and electrostatic interactions, which could affect its solubility and reactivity. Additionally, the inner salt formation indicates that it may possess zwitterionic characteristics, influencing its behavior in different solvents. Overall, this compound's structural complexity and functional diversity make it a subject of interest in fields such as organic synthesis, materials science, and medicinal chemistry.

Formula: C₃₇H₃₃N₃O₇

InChI: InChI=1/C37H33N3O7/c41-29-11-12-30(42)40(29)47-37(45)22-9-10-23(36(43)44)26(19-22)31-27-17-20-5-1-13-38-15-3-7-24(32(20)38)34(27)46-35-25-8-4-16-39-14-2-6-21(33(25)39)18-28(31)35/h9-10,17-19H,1-8,11-16H2

InChI key: InChIKey=KWADUASJUMATIK-UHFFFAOYSA-N

SMILES: C([O-])(=O)C1=C(C=2C=3C(=C4C5=C(C3)CCCN5CCC4)[O+]=C6C2C=C7C8=C6CCCN8CCC7)C=C(C(ON9C(=O)CCC9=O)=O)C=C1

Synonyms:

• 1H,5H,11H,15H-Xantheno[2,3,4-ij:5,6,7-i'j′]diquinolizin-18-ium, 9-[2-carboxy-5-[[(2,5-dioxo-1-pyrrolidinyl)oxy]carbonyl]phenyl]-2,3,6,7,12,13,16,17-octahydro-, inner salt
• 6-Carboxy-X-rhodamine succinimidyl ester
• 6-ROX, SE [6-Carboxy-X-rhodamine, succinimidyl ester
• 6-Carboxy-X-rhodamine sucinimidyl ester
• 6-CXR SE
• ROX NHS ester
• 6-ROX SE, 6-CXR SE
• 6-ROX, SE
• 6-CARBOXY-X-RHODAMINE N-SUCCINIMIDYL ESTER
• 6-ROX, SE [6-Carboxy-X-rhodamine, succinimidyl ester] *CAS#: 216699-36-4*
• 6-ROX, SE [6-Carboxy-X-rhodaMine, suciniMidyl ester]
• 6-Carboxy-X-rhodamine, succinimidyl ester, single isomer
• ROX-NHS ester

6-Carboxy-X-rhodamine, succinimidyl ester

CAS: 216699-36-4

Formula: C₃₇H₃₃N₃O₇

Purity: 96%

Molecular weight: 631.6738

Ref: IN-DA01E3SL

9-(2-Carboxy-5-(((2,5-dioxopyrrolidin-1-yl)oxy)carbonyl)phenyl)-2,3,6,7,12,13,16,17-octahydro-1H,5H,11H,15H-xantheno[2,3,4-ij:5,6,7-i'j']diquinolizin-18-ium inner salt

CAS: 216699-36-4

9-(2-Carboxy-5-(((2,5-dioxopyrrolidin-1-yl)oxy)carbonyl)phenyl)-2,3,6,7,12,13,16,17-octahydro-1H,5H,11H,15H-xantheno[2,3,4-ij:5,6,7-i'j']diquinolizin-18-ium inner salt

Purity: 96%

Molecular weight: 631.69g/mol

Ref: 54-OR1074658

6-ROX, SE

CAS: 216699-36-4

6-ROX, SE, an amine-reactive carboxy-X-rhodamine isomer, labels oligonucleotides for DNA sequencing.

Formula: C₃₃H₃₀N₂O₅

Purity: 98%

Color and Shape: Solid

Molecular weight: 631.67

Ref: TM-TD0070

6-Carboxy-X-rhodamine, succinimidyl ester

CAS: 216699-36-4

Single isomer of 5(6)-ROX. It is a fluorescent dye used in RT-PCR methods as an internal reference to determine fluorescence variation that is not associated with the amplification process (plastic of the wells, small differences in concentration or volume, instrument measurements). It produces a constant fluorescence emission signal during the PCR process that is used to normalise the emission produced by the reporter. The fluorescence signal is compatible with most reporters. It is used to label the 5’ end of oligonucleotides as a reporter in the presence of a quencher at the 3’ end (dual labelled probe). During amplification, the dye is cleaved, and the fluorescence increases proportionally with the amount of the specific sequence amplified during the PCR process. The development of the fluorescence signal is therefore specifically related to the amplification of the target sequence.

Formula: C₃₇H₃₃N₃O₇

Purity: Min. 95%

Molecular weight: 631.67 g/mol

Ref: 3D-FC72893