Building Blocks

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Leu-Leu-Leu-OH is a pentapeptide that is used in cancer treatment to inhibit the growth of cancer cells. It prevents the production of proteins and, as a result, cell division. Leu-Leu-Leu-OH has been shown to be effective against tumor cells with an antibody that binds to the surface of cells. The monoclonal antibody is taken up by the cancer cells through receptor mediated endocytosis, which leads to inhibition of protein synthesis and cell death.

2-Methyl-5-nitrobenzaldehyde is a nitro compound that is used in the synthesis of dobutamine. It has been shown to undergo rearrangements, with the formation of 2-methyl-5-nitrophenol. Kinetic studies have shown that chlorine can be substituted for hydrogen at the 2 position, and this substitution leads to an increase in reactivity. 2-methyl-5-nitrobenzaldehyde also reacts with dopamine to form a ketone. The hydroxy group on this molecule is nucleophilic and can attack electrophiles, making it useful as an active site for synthetic reactions. This compound is also pyrophoric, which means it will spontaneously ignite in air and burn until all its fuel is consumed.

2,2-Paracyclophane is a high-sensitivity c-reactive protein (hsCRP) that has been isolated from the fungus Cryptococcus neoformans. This compound has shown to have anti-cancer properties in animal studies. 2,2-Paracyclophane binds to fatty acids and is soluble in water, which may be due to its hydrogen bonding with the hydroxyl group at C1. The crystal structure of this compound reveals that it has a cyclohexane ring and two fatty acids. The thermal expansion coefficient of this molecule is also high, which suggests that it may be suitable for use as a solid lubricant.

Methyl trans-4-bromo-2-butenoate is a synthetic compound that contains a hydroxyl group and two bromine atoms. It is synthesized by the reaction of diethyl succinate, hydrogen, and piperazine in an aqueous solution. Methyl trans-4-bromo-2-butenoate has been shown to have antineoplastic activity in combination with epidermal growth factor (EGF) and carbohydrate conjugates. It also binds to cell surface receptors on the epidermal cells, inhibiting their growth. The structural formula of methyl trans-4-bromo-2-butenoate can be seen below: [[File:Methyltrans4bromobutanoate.png|thumb|300px|left|The structural formula of methyl trans-[4] -[bromo]-[2] -butenoate.]]

Versatile small molecule scaffold

4-Bromo-2,5-dimethoxybenzaldehyde is a nucleophilic compound that can act as an iminium. It is used in the synthesis of chalcones, which are aromatic compounds that have been found to have anticancer properties. 4-Bromo-2,5-dimethoxybenzaldehyde has two isomers: 2,4-dimethoxybenzaldehyde and 2,5-dimethoxybenzaldehyde. The separation of these compounds can be achieved using chromatography with a silica gel column. This process can be done on both the mixture of the two isomers or on one specific isomer. The synthetic pathway for this product begins with benzylpiperazine and piperazine. These two molecules react to form 3,4-dichlorobenzylpiperazine, which reacts with dimethoxybenzyl chloride to form 4-bromo-2,5-dim

Versatile small molecule scaffold

1-(But-3-yn-1-yl)piperidine is a chiral compound that inhibits the reuptake of serotonin. It has been shown to be an effective inhibitor of the serotonin transporter and to cause an increase in extracellular serotonin levels. 1-(But-3-yn-1-yl)piperidine also has affinity for the dopamine transporter, which may account for its antidepressant effects.

Versatile small molecule scaffold

Phentolamine is a synthetic mesylate that is used as an antihypertensive agent, and for the treatment of Raynaud's syndrome and pheochromocytoma. Phentolamine is also used to prevent frostbite and to treat various types of shock. Phentolamine blocks alpha-2-adrenergic receptors, thereby decreasing sympathetic nerve impulses to the heart, blood vessels, kidneys, and other organs. This drug also acts as a histamine antagonist by blocking H1-receptors on vascular smooth muscle cells. Phentolamine has been shown to have no significant effects on 5-hydroxytryptamine (5HT) release in vitro or in vivo.

Versatile small molecule scaffold

2,2'-Dithiodianiline is a redox-active molecule with a redox potential of -0.08 V. It has been shown to inhibit the polymerase chain reaction by binding to DNA and inhibiting the enzyme DNA polymerase. 2,2'-Dithiodianiline is a potent inhibitor of bacterial growth in vitro, and has been shown to be cytotoxic in vivo. 2,2'-Dithiodianiline inhibits the growth of resistant mutants that are resistant to other antibiotics such as penicillin and ampicillin. This compound binds to molybdenum at an optimum concentration of 0.5 mM and coordinates through electrostatic interactions with the molybdenum atom. Structural analysis reveals that 2,2'-dithiodianiline forms hydrogen bonds with adenine residues in DNA and interacts with guanine residues in RNA through π-π stacking interactions. This interaction prevents transcription by blocking the binding

Isocytosine is a prodrug that has been synthesized with the intramolecular hydrogen on the nitrogen atoms, which makes it more chemically stable. Isocytosine is a reactive molecule, and can react with tautomers to form isocytosine derivatives. Isocytosine contains three hydrogen atoms that are transferable through reactions to other molecules. The chemical stability of isocytosine allows for its use in wastewater treatment. It also has metabolic effects, such as the inhibition of colorectal adenocarcinoma and metabolic disorders. Isocytosine can be used as a model system for studying transfer reactions and reaction mechanisms.

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Methyl 5-hexynoate is a synthetic product that can be synthesized from soybean lipoxygenase and hydrogenation reduction. This product has been shown to be a useful synthon for the synthesis of monoclonal antibodies with high binding affinity. The synthetic pathway, which involves cross-coupling and asymmetric synthesis, is outlined in the diagram below. The following are the steps involved in the production of methyl 5-hexynoate: 1) Addition of ethyl bromide to terminal alkynes 2) Addition of hydrochloric acid 3) Reaction with potassium tert-butoxide 4) Hydrogenation reduction 5) Cross-coupling reaction 6) Asymmetric synthesis

Versatile small molecule scaffold

Boc-His(Trt)-OH is a chemical compound that has been used in the laboratory to study uptake and binding of compounds. It is stable in complex with albumin, which has led to its use as a model system for studying hepatic steatosis. This chemical can be synthesized by solid-phase synthesis with trifluoroacetic acid and polypeptide synthesis. FT-IR spectroscopy has been used to characterize Boc-His(Trt)-OH, revealing its chemical diversity.

Versatile small molecule scaffold

Versatile small molecule scaffold

Versatile small molecule scaffold

Versatile small molecule scaffold

Versatile small molecule scaffold

3-Hydroxy-5-methylpyridine (3HMP) is a chemical substance that has been classified as an amine. It is a product of the metabolism of purines, which are nitrogenous bases found in DNA and RNA. 3HMP is produced by aerogenic bacteria (such as Enterobacter), and can be used to estimate the number of these bacteria present in water samples. 3HMP has been shown to have antiviral properties against influenza virus, and can be used as a biomarker for the presence of other viruses in animals. 3HMP also has mineralization properties, which have been studied extensively, particularly with regards to pancreatic disease.

4-Chloro-8-quinolinol is a quinoline derivative that has been shown to have pharmacological effects. It is used in the synthesis of other compounds, such as 5-chloro-8-hydroxyquinoline, which is used in the treatment of cancer. 4-Chloro-8-quinolinol can also be prepared by oxidizing 5,6,7,8 tetrachloroquinoline with chlorine and ammonia. The photophysical properties of this compound are analogous to those of benzothiazole derivatives. The fluorescence emission spectrum ranges from 360 nm to 450 nm with a maximum at 390 nm and emission intensity at 350 nm. This compound exhibits fungitoxicity against Penicillium notatum and Aspergillus fumigatus.

Versatile small molecule scaffold

Versatile small molecule scaffold

Monomethyl glutarate is a monomer for the synthesis of polymers. It has been used in the past as a precursor for the production of polyacrylic acid and its copolymers. Monomethyl glutarate is synthesized by the reaction of hydrochloric acid, high salt, and an expression plasmid containing glutarate dehydrogenase. This compound is also used as a reagent in kinetic studies of fatty acids and glutaric acid. Monomethyl glutarate is an acidic compound with a pKa value of 3.5 at 25°C. It is rapidly hydrolyzed in water to form monomethyl glutarate acid, which has a pKa value of 2.4 at 25°C. Monomethyl glutarate can be ingested orally or applied topically due to its low energy requirements for hydrolysis in water.

Versatile small molecule scaffold

Versatile small molecule scaffold

Versatile small molecule scaffold

Versatile small molecule scaffold

2-Bromo-5-fluoro-4-nitroaniline can be synthesized in a reaction system of ammonium chloride, hydrochloric acid, and water vapor. The reaction is carried out at a temperature of 190°C under reflux. The efficiency of this synthesis is high, and the chemical yield is about 90%.

Versatile small molecule scaffold

4-Acetamidobenzenesulfonyl azide (4ABS) is a low detection reagent that can be used for the determination of 4-acetamidobenzoic acid. It reacts with the amine group in 4-acetamidobenzoic acid to form a sulfonamide intermediate and releases an azide ion. The linear calibration curve was obtained using vibrational spectroscopy and has a detection sensitivity of 0.03 ppm. This method can also be used to determine the functional groups present in dopamine, which have been shown to affect electrochemical impedance spectroscopy measurements.

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aliphatic diol.  It has been shown to have an inhibitory effect on bacterial growth

Versatile small molecule scaffold

7-Bromo-1-methylnaphthalene is a fluorescent dye that can be used to measure the concentration of DNA, RNA, and proteins. This compound is an intercalator, which means that it can bind to double stranded DNA or RNA near the center of the molecule where there is a space for binding. It has been used in the study of the thymic gland because it binds to DNA and RNA in cells from this organ. 7-Bromo-1-methylnaphthalene has also been used as a skeleton for organic compounds, such as dimethylammonium. The bromine atom in this compound can be replaced with other atoms like iodine or chlorine to make different colored dyes.

3-Methoxythiophene-2-carbaldehyde is a ligand that has been shown to form a stable complex with potassium chloride. This compound is also reactive, and can be stabilized in the reaction vessel. In the presence of sulfate ions, 3-methoxythiophene-2-carbaldehyde will react to form a phosphotungstic acid precipitate. The dehydrated salt can be recrystallized by adding phosphotungstic acid, which stabilizes the product.

Versatile small molecule scaffold

2,5-Diethoxyterephthalohydrazide is an organic compound that has been used for the synthesis of linkers with various functional groups. It is a reactive intermediate in the synthesis of amines and compounds containing amine functional groups. 2,5-Diethoxyterephthalohydrazide has been shown to be stable under environmental conditions and can be used as a linker in organic solvents such as amines, alcohols or esters. This compound has also been shown to exhibit photocatalytic activity when irradiated by UV light. Techniques such as analytical chemistry and techniques can be used to characterize this compound's reactivity and stability.

Versatile small molecule scaffold

Versatile small molecule scaffold

CASIN is a lysine-derived antimicrobial agent that inhibits the growth of bacteria by binding to the peptide chains of collagen, which are found in skin and mucous membranes. CASIN has been shown to inhibit the growth of many bacterial species, including those that are resistant to other antibiotics. CASIN can be used for the treatment of infectious diseases caused by bacteria, such as bacterial vaginosis or chlamydia. CASIN has also been shown to reduce body mass index in animal models. The mechanism of action is not known but may involve interference with an enzyme that controls the biosynthesis of fatty acids. The use of CASIN in humans is limited due to its toxicity on human cells and potential safety concerns.

Versatile small molecule scaffold

3-Aminopyrrolidin-2-one hcl is an antibiotic that is used to treat tuberculosis. It inhibits the enzyme transacylase, which catalyses the conversion of L-lysine into L-pipecolic acid in bacteria. This antibiotic has been shown to be effective against Mycobacterium tuberculosis and Mycobacterium avium complex. 3-Aminopyrrolidin-2-one hcl has a broad spectrum of activity against gram positive and gram negative bacteria, but it is not active against acid-fast bacteria.

Diethyl Acetylphosphonate is a synthetic chemical that is used in the production of ethyl esters, which are used as intermediates for the production of epoxides. It has shown to be a bidentate ligand and reacts with primary amines. Diethyl Acetylphosphonate can be made by reacting phosphorus pentachloride with ethyl acetate and hydrochloric acid. The reaction mechanism is similar to that of other organophosphorus compounds, in which a phosphine oxide intermediate reacts with an organic halide. Diethyl Acetylphosphonate has shown to be effective in detergent compositions and triethyl orthoformate, as well as alkanoic acid.

1H,1H,7H-Dodecafluoroheptanol is a perfluorinated compound. It has been shown to be an efficient scavenger of reactive oxygen species (ROS) and to have a protective effect on collagen. The reaction mechanism of 1H,1H,7H-dodecafluoroheptanol is not fully understood. However, it has been shown that the chloride ion plays a key role in the formation of this product from 1H,1H,7F-dodecafluoroheptane. The reaction vessel used in this synthesis is critical because it must be anhydrous to prevent the formation of 1HF3OCl. Magnetic resonance spectroscopy has been used to study the chemical structures of this compound.

Versatile small molecule scaffold

Versatile small molecule scaffold

Versatile small molecule scaffold

Versatile small molecule scaffold

4-(2-Bromoethyl)morpholine hydrobromide is a solvent that is used as an agent in the production of other chemicals. It is a colorless, crystalline solid with a constant melting point of 130 to 131 degrees Celsius. 4-(2-Bromoethyl)morpholine hydrobromide is soluble in acetone, ethanol, ether, and water. This chemical has been shown to be toxic and should be handled with care.

Versatile small molecule scaffold

Versatile small molecule scaffold

Versatile small molecule scaffold

Versatile small molecule scaffold

1-Hydroxycyclopentane-1-carbonitrile is a monomer that is hydrolyzed to form benzoin and cyanohydrins. It can be used in the production of scifinder as a monomer or dimerizer.

1-Bromo-4-iodobenzene is an aryl halide that can be synthesized by the cross coupling of ethyl formate and hydrochloric acid. This compound is useful in analytical applications, such as chromatographic methods, due to its high solubility in organic solvents. It is also used in synthetic procedures for the preparation of other aryl halides. 1-Bromo-4-iodobenzene has been used to synthesize calcium carbonate via the Suzuki coupling reaction with sodium salts, which are nucleophiles. The carbonyl group on this molecule reacts with the nucleophile, forming an alkyl group and a metal salt. Transfer reactions involving these salts can produce other products with different functional groups.

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MW 20,000 - 30,000

2-Methoxy-benzenesulfonic acid is a synthetic chemical compound that is used in the production of polymers and other ester compounds. It can be produced by reacting benzenesulfonyl chloride with methanol in the presence of a strong acid catalyst. 2-Methoxy-benzenesulfonic acid reacts with radiation to produce reactive oxygen species that are capable of damaging cellular structures. The molecule contains an intramolecular hydrogen bond, which stabilizes the structure and helps to form hydrogen bonds with other molecules. 2-Methoxy-benzenesulfonic acid also has a hydroxyl group, which allows it to function as an acidic compound that can react with water and cause inflammation. This functional group also makes it soluble in water, allowing it to penetrate tissue structures.

Versatile small molecule scaffold

2-(4-Methoxy-1H-indol-3-yl)ethan-1-amine is a synthetic compound that belongs to the class of organocatalysts. It is a serotonin receptor agonist, and has been shown to act as an antagonist at the 5HT2AR. This drug has been shown to have stereoselective effects in vitro, with high affinity for the S form of 5HT2AR. 2-(4-Methoxy-1H-indol-3-yl)ethan-1-amine also has some activity against dopamine receptors, but not as much as other compounds in its class. !--[if !supportLists]-->· !--[endif]-->This drug binds to speciogynine and alstovenine receptors, which are part of the opioid system.!--[if !supportLists]-->· !--[endif]-->Modelling studies suggest that 2-(4-M

Versatile small molecule scaffold

Versatile small molecule scaffold

8-Chloro-3,7-dihydro-1H-purine-2,6-dione is a reactive molecule that binds to the active site of bacterial cyclic nucleotide phosphodiesterases and inhibits their activity. This inhibition prevents the breakdown of cAMP and cGMP, which are important second messengers in eukaryotic cells. 8-Chloro-3,7-dihydro-1H-purine-2,6-dione is also a potent inhibitor of protein synthesis and has been used in research studies on wheat leaves.

4,5-Dihydroxy-2,3-pentanedione is a carbonyl compound that is the product of the oxidation of ascorbic acid. It is used in wastewater treatment and has antimicrobial properties against infectious diseases. This compound has been shown to inhibit protein synthesis by binding to the ribosome and preventing the formation of peptide bonds between amino acids. 4,5-Dihydroxy-2,3-pentanedione has also been shown to bind to plasma proteins, which may be due to its acyl chain structure. 4,5-Dihydroxy-2,3-pentanedione can be synthesized in a catalytic mechanism that involves dehydroascorbic acid and molecular oxygen.

Tripropylphosphine is a fatty acid that can be synthesized by reacting tripropyl alcohol with phosphorus trichloride. Tripropylphosphine is soluble in organic solvents, and has an optical rotation of +58°. It has been shown to have cancer-inhibiting properties, as well as the ability to inhibit tumor growth and induce apoptosis in cancer cells. This compound may also be used as a growth regulator, since it inhibits the synthesis of certain proteins and enzymes.